PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn107971
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family Dof
Protein Properties Length: 89aa    MW: 9996.18 Da    PI: 10.7487
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn107971genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof47.24.5e-1517453462
      zf-Dof 34 kaCrryWtkGGalrnvPvGggrrknkkss 62
                ++CrryWt+GGalr vPvGgg+r++kk++
  Achn107971 17 QTCRRYWTRGGALRSVPVGGGCRRSKKVK 45
                79***********************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074789.0E-81043IPR003851Zinc finger, Dof-type
PfamPF027011.9E-101743IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    Send to blast
MVFSSPPIYL DHPNWQQTCR RYWTRGGALR SVPVGGGCRR SKKVKRLNLS RQFVGASENN  60
QYWPDGNNTW TEFSGVLNSS SFIGERSA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PF943e-20A0A2R6PF94_ACTCH; Dof zinc finger protein like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.12e-12DNA binding with one finger 2.4