PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn110491
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 149aa    MW: 16074.8 Da    PI: 6.2942
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn110491genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like42.21.8e-1320452651
     G2-like 26 kAtPktilelmkvkgLtlehvkSHLQ 51
                +AtPk++l+lm+v gLt++hvkSHLQ
  Achn110491 20 EATPKQVLQLMDVRGLTISHVKSHLQ 45
                7************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.4E-111945IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-91946IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MATLVAMRHL PLENWTEDSE ATPKQVLQLM DVRGLTISHV KSHLQIAVEE DQNRVSSKRS  60
KFGNTDIAQA EDEVASGCGL SLSLSLHHPS AQRSLHHPSA QRSNASSTSE ISEAISSYSR  120
SNFNDCSGFS LSEKHSINLD LSIALCGT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028117629.18e-26uncharacterized protein LOC114315240
TrEMBLA0A2R6RE524e-54A0A2R6RE52_ACTCH; Myb family transcription factor
STRINGVIT_01s0137g00050.t012e-24(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA54332238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.12e-08G2-like family protein