PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn117281
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 181aa    MW: 19249.3 Da    PI: 9.9646
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn117281genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.5e-183181155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t++ Aa+a++aa ++l+g
  Achn117281 31 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPDAAARAYDAALLCLKG 81
                59*****998.**********9...336************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.60E-183189No hitNo description
SMARTSM003803.5E-303295IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.9E-293291IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-193291IPR016177DNA-binding domain
PfamPF008474.8E-113281IPR001471AP2/ERF domain
PROSITE profilePS5103221.1143289IPR001471AP2/ERF domain
PRINTSPR003672.8E-83344IPR001471AP2/ERF domain
PRINTSPR003672.8E-85571IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MVKSEHKIQT QPNKAMPSSS SSSSSSSMIK KKYKGVRMRS WGSWVSEIRA PNQKTRIWLG  60
SYSTPDAAAR AYDAALLCLK GKSVNLNFPT SSSFFHHHHH DTVLSPKSIQ RVAAAAAAAN  120
SFNDTTNPPP PPLPSTSSSS SSTTTTSSSS CSASSPSMSS SPFNHIEDDF SLASSLDDYT  180
*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ2284582e-36FJ228458.1 Glycine max AP2 domain-containing transcription factor 6 (AP2-6) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021660750.11e-47ethylene-responsive transcription factor ERF014-like
SwissprotQ9SFE46e-44ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A2R6Q1X62e-62A0A2R6Q1X6_ACTCH; Ethylene-responsive transcription factor
STRINGPOPTR_0002s08610.11e-45(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-31ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]