PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn118631
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 411aa    MW: 45790.3 Da    PI: 4.8593
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn118631genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.51.4e-32551971128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksg 81 
                 lp+G++F+P+deel+ e+L++k++  +      +  +e+i+++d    i++++P++Lp  +k+e ++++fF+++ ++yatg+rk+r+         ++ 
  Achn118631  55 LPAGVKFDPSDEELL-EHLAAKCRLGNskphmfI--DEFIPTIDkddgICYTHPENLP-GAKKEGSSIHFFHRTTNAYATGQRKRRKihnehsltKEDV 149
                 799************.999999887775666432..333444433345**********.556678899******************8688888855589 PP

         NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                 +W++tgk+k+v++ +g ++g kk +v+y   ++ +k+ k++Wvmh+y+l
  Achn118631 150 RWHKTGKTKTVVE-NGVQKGYKKFMVLYsiPKKGSKPDKSNWVMHQYHL 197
                 9***********9.999***********6635666777*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-3740216IPR003441NAC domain
PROSITE profilePS5100530.54355216IPR003441NAC domain
PfamPF023655.5E-1456197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MARSWLIDCK GIATKVKSAS LPPANQIKDC GANRECPQCR YRIDNTDVSQ EWPGLPAGVK  60
FDPSDEELLE HLAAKCRLGN SKPHMFIDEF IPTIDKDDGI CYTHPENLPG AKKEGSSIHF  120
FHRTTNAYAT GQRKRRKIHN EHSLTKEDVR WHKTGKTKTV VENGVQKGYK KFMVLYSIPK  180
KGSKPDKSNW VMHQYHLGID EDEQEGQYVV SKILYQQQKQ SDNNAICQVV EDSDMGLIQT  240
SPRTPRTNTP NPPRPGRSIL CDDAIDDYAP QPSAQDLKLF IFSNTEQEAE VVRETLHPSS  300
DPHFCDDVET QTCLAGESQA VDGNGVDDLL LCNEIFDSYV TLDDSGLNGV AFDGFARFTN  360
DIPGVDNSVI CGIVDLENLE LDTPPDFQLA VTFFSLASSI ILFTSLICNM *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028118727.10.0SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLA0A2R6RZ150.0A0A2R6RZ15_ACTCH; NAC domain-containing protein
STRINGEOY025311e-161(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81752229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.17e-96NAC domain containing protein 44