PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn123771
Common NameEIL4
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family EIL
Protein Properties Length: 608aa    MW: 68488 Da    PI: 6.1039
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn123771genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3429.73e-131383861323
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 e+l++rmwkd+++lkr+ker+k    +++ a++++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWkekv
  Achn123771  38 EDLERRMWKDRIKLKRIKERQKLA--AQQ-AAEKEKPKQMSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKV 133
                 89***************9999963..355.599****************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----G CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkp 198
                 +fd+ngpaai+ky+a++l+  +e++   ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lgl+k q+ ppykkp
  Achn123771 134 KFDKNGPAAITKYEAECLAKVKEERI--QKGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGSEEWWMKLGLPKGQS-PPYKKP 229
                 ******************98877776..77999***********************************************************.9***** PP

                 GG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3 199 hdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkqspkvtlsceqkedvegkk 288
                 hdlkk+wkv+vLtavikhmsp+i++ r+l+r+sk+lqdkm+akes ++l vl++ee+++++ s ++            r++++k  +s+++++dv+g +
  Achn123771 230 HDLKKMWKVGVLTAVIKHMSPDIAKTRRLVRKSKCLQDKMTAKESLIWLGVLSREESLIRQSSGDNGtsgttevpsGGRREKKKPSVSSDSDYDVDGID 328
                 ***************************************************************9944446777876667799999***********666 PP

                 XXX.XXXXXXXXXX.......................XXXXXXXXXXXXXXXXXXXXX CS
        EIN3 289 eskikhvqavktta.......................gfpvvrkrkkkpsesakvssk 323
                 +   + ++++++++                         + + +rk+++++s+ ++++
  Achn123771 329 DGVGSVSSKDDERDqlpdvepsnqprnstarrlqdkeRREEQPRRKRPRVRSSPTNQQ 386
                 6666766666666656666666666666666555555445555555555555555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.4E-12538285No hitNo description
Gene3DG3DSA:1.10.3180.104.4E-70161291IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.7E-60166288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 608 aa     Download sequence    Send to blast
MGVMEEIGVD ISSDIEVDEI RCENIAEKDV SDEEIEAEDL ERRMWKDRIK LKRIKERQKL  60
AAQQAAEKEK PKQMSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
ASDNIRAWWK EKVKFDKNGP AAITKYEAEC LAKVKEERIQ KGNSQSILQD LQDATLGSLL  180
SSLMQHCDPP QRKYPLEKGV PPPWWPTGSE EWWMKLGLPK GQSPPYKKPH DLKKMWKVGV  240
LTAVIKHMSP DIAKTRRLVR KSKCLQDKMT AKESLIWLGV LSREESLIRQ SSGDNGTSGT  300
TEVPSGGRRE KKKPSVSSDS DYDVDGIDDG VGSVSSKDDE RDQLPDVEPS NQPRNSTARR  360
LQDKERREEQ PRRKRPRVRS SPTNQQAAPY SREHLHDEPI NTLPDINQTD VISHMHGSQH  420
ENNANETLRP LDKDLQGHYQ LPASEFDQIS TIPSADVIPT DNIFAGGRPI PYPVVQENSQ  480
LHHGPTYDFY IPSLAYMPSG DGQQTQMAFT EPWDRPVDSG VNASALRRNE NDIPNPGGDM  540
IQYLKGTFQN EQDRPVMNHF GSPLNSLSLD YGGLNSPFNL EIHGTSSIDT SDIDFLLDDE  600
LIQCFGA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A9e-741652969140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF3190440.0KF319044.1 Actinidia chinensis EIN3-like protein EIL4 (EIL4) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028106973.10.0ETHYLENE INSENSITIVE 3-like 3 protein isoform X2
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2R6P8T40.0A0A2R6P8T4_ACTCH; ETHYLENE INSENSITIVE 3-like 3 protein
STRINGXP_009364731.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-159ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Nieuwenhuizen NJ, et al.
    Natural variation in monoterpene synthesis in kiwifruit: transcriptional regulation of terpene synthases by NAC and ETHYLENE-INSENSITIVE3-like transcription factors.
    Plant Physiol., 2015. 167(4): p. 1243-58
    [PMID:25649633]
  4. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  5. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]