PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn124381
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 167aa    MW: 19406 Da    PI: 7.3207
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn124381genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM478.4e-1536169128
         NAM  69 atgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++g r++r  ++ yWk+t  +k+++  +++ vg k +L fy+g +++g++t+W mheyr+
  Achn124381   3 TNGVRPKRENSDEYWKQTIPNKHIMY-ENKIVGYKMSLDFYEGGHRDGRRTEWKMHEYRI 61 
                 5799****999***************.9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.786182IPR003441NAC domain
SuperFamilySSF1019411.57E-15367IPR003441NAC domain
PfamPF023652.8E-6861IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MFTNGVRPKR ENSDEYWKQT IPNKHIMYEN KIVGYKMSLD FYEGGHRDGR RTEWKMHEYR  60
IHKNSPPPPP KNSNVADSMK KSPIYIYTQT HIYIYIDIDI IDTEEENLEE EEEERISSLI  120
QKCPKHAKHT NLPQIHARLL TLSLPTCISL TKIVSSSALT PHGNID*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.11e-11NAC domain containing protein 1