PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn126291
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 151aa    MW: 17113.5 Da    PI: 5.2158
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn126291genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM371e-1195140148
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 
                 lppG+rF+Ptdeelv +yL+ k+ g++l++   i+e+++y+++ ++L 
  Achn126291  95 LPPGYRFQPTDEELV-YYLTDKILGRPLPI-VPIREINLYNYNHQQLS 140
                 79*************.**************.66**********99996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-1189142IPR003441NAC domain
PROSITE profilePS5100512.48595150IPR003441NAC domain
PfamPF023651.9E-596119IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MQFADHSTIN DLGSPMALAE RSEREMAVAA TRRSCSLDAR HSPITFACVI VEWRRSCIMS  60
KADFSHLLLP RMEEMYEEGG VNGGASSIEY YMDSLPPGYR FQPTDEELVY YLTDKILGRP  120
LPIVPIREIN LYNYNHQQLS RITLSPMSFS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.18e-11NAC-like, activated by AP3/PI