PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn126301
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 222aa    MW: 24981.1 Da    PI: 6.2303
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn126301genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.41.1e-0934288128
         NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++k+v+  +++ vg k +L fy+g  ++g+kt+W mhey++
  Achn126301   3 SEKPVMY-ENNIVGYKMSLDFYEGGPRDGRKTEWKMHEYKI 42 
                 5789999.8899***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.652167IPR003441NAC domain
SuperFamilySSF1019412.35E-14366IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MTSEKPVMYE NNIVGYKMSL DFYEGGPRDG RKTEWKMHEY KILPTRKSNA TDSMKLDDLV  60
LCKIYSTSKK AKDVPENQRT ELAAKNANQD SRPLGISNGM NMDGHHMPLV WPSMSFQELS  120
RVQIQNPSML SRGDNNQLYD LTYLDGLING SSHDNCPSSL GAHMMHTEER STPNLLPHNS  180
ERHRIMLEPV DDHTSTLTNL SISYPEFSGD QISNLSLLSS C*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-11NAC-like, activated by AP3/PI