PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn137551
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 172aa    MW: 19190.4 Da    PI: 10.1913
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn137551genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.6e-072372655
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                + +E++RR  ++   ++L +l+P+     psk ls  + L ++  YIk+L+
  Achn137551 23 KTVEKNRRMIMKGLCSKLISLVPPhH-FKPSKELSQQAQLDQVALYIKQLK 72
                679*********************66.589999****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.8541771IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-82084IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-62180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MGLIVLSVGM KKSNSSPEKL DRKTVEKNRR MIMKGLCSKL ISLVPPHHFK PSKELSQQAQ  60
LDQVALYIKQ LKERVEELKV KRSLAMGDKI GTNTNNIRDT TDGSYLGFPV VFELRDLGSS  120
LEVTFISGLK KNFVLNEVIS VLQDEGADVV KVSRVGVETS RVYQRLQQLL C*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028121201.15e-62transcription factor bHLH162-like isoform X1
TrEMBLA0A2R6PS341e-109A0A2R6PS34_ACTCH; Transcription factor bHLH36 like
STRINGVIT_17s0000g08150.t012e-51(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60831423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-15bHLH family protein