PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn140751
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 140aa    MW: 15712.8 Da    PI: 10.1279
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn140751genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.78.6e-12111135125
                 ---SS-EEEEEEE--TT-SS-EEEE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYY 25 
                 ++Dgy WrKYGqKe+ +s+fprs Y
  Achn140751 111 MEDGYGWRKYGQKEILNSKFPRSQY 135
                 58********************955 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-9104135IPR003657WRKY domain
PROSITE profilePS5081110.2106139IPR003657WRKY domain
SuperFamilySSF1182907.85E-9109135IPR003657WRKY domain
SMARTSM007740.0062111139IPR003657WRKY domain
PfamPF031061.4E-8112136IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MGTLRPEKSR TDLERVMEKL LMGRDWAAQL QVLLRRPTGL DGPGSADELA VKILRSFTET  60
LSALNSGDVD QIPARSSDSG ESRQTPAVID RRGCYKRRKT SDSRVNVSAS MEDGYGWRKY  120
GQKEILNSKF PRSQYYLIQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028079122.15e-42WRKY DNA-binding transcription factor 70-like
TrEMBLA0A2R6RR231e-89A0A2R6RR23_ACTCH; WRKY transcription factor 70
STRINGVIT_13s0067g03140.t012e-37(Vitis vinifera)
STRINGcassava4.1_013417m2e-37(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-24WRKY DNA-binding protein 70