PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn149891
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 235aa    MW: 26502.1 Da    PI: 9.5536
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn149891genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.93.9e-12117143127
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekA 27 
                 k r+rWt++LH+rFve+v++LGG+ek 
  Achn149891 117 KSRIRWTQDLHKRFVECVNRLGGAEKK 143
                 68**********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.33E-5115164IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.4E-9116152IPR009057Homeodomain-like
PfamPF143796.6E-16162205IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MHRAVVQMCQ PSKADWEKQN YLNLEQSNTL GSLVKSAFSS NRNCTSSEKF VSSCGDLQER  60
KILMLLQNKC EVENSIPNPR QPCTGFGGYQ HRPPNNSNGS LSLAASNSAS SSSLIPKSRI  120
RWTQDLHKRF VECVNRLGGA EKKFDMALLN SMPQLDSKTG TQIVDALRQQ IEVQRRLYEQ  180
LESQRHLQLQ IEEQGKQLKK ILDHQMIKNK TLIDNAKDTT QSNVSTPLRP FESI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ0WVU31e-28PHL5_ARATH; Myb family transcription factor PHL5
TrEMBLA0A2R6RD201e-142A0A2R6RD20_ACTCH; Myb family transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.18e-29G2-like family protein