PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn152431

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

G2-like

Protein Properties

Length: 213aa MW: 24149.1 Da PI: 5.4474

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn152431	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	30.5	8.2e-10	23	48	1	26
G2-like 1 kprlrWtpeLHerFveaveqLGGsek 26 k+rl+Wt eLH+ F +av+qLGG++k Achn152431 23 KERLKWTDELHDLFEKAVNQLGGPDK 48 68**********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.1E-8	21	49	IPR009057	Homeodomain-like
Pfam	PF14379	4.5E-15	64	105	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence Send to blast
MPSRAGRSFD SDTGSGRSDG SGKERLKWTD ELHDLFEKAV NQLGGPDKIP DVQVHSRIFQ 60 QCAQLNEALQ IQKEAERRLS EQLEVQRSLK LKIEAQGRYL ERIQEDLNNR INNAVKPGKA 120 FSPISMLSIC EKSNSNAMES ESDLEIDKAE AMSEEEFRGP KRLRAGDEDV FVPRYMFHSE 180 SFNQSMFLSK RNSFPWSVTS CNLPLMPSLY TL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028075865.1	4e-68	myb family transcription factor PHL7-like
TrEMBL	A0A2R6R8D9	1e-131	A0A2R6R8D9_ACTCH; Myb family transcription factor
STRING	XP_006429402.1	2e-52	(Citrus clementina)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10101	20	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-16	G2-like family protein