PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn156891
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family FAR1
Protein Properties Length: 149aa    MW: 17235.3 Da    PI: 4.7793
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn156891genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.53.2e-1194135143
        FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 
                 +fYn+YA++vGFsvr+sk++k kr g  ++r f+Cs +g+r +
  Achn156891  94 EFYNAYAYKVGFSVRRSKEYKDKR-GMLVTRIFCCSYKGNRGK 135
                 6********************955.559999********9865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-794133IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MEIEINSSSP ISCEVLDIDG NYARDDCNSR RKLEFKDDDD FFNSNVPIEE ESEQHVLQNS  60
LDTLGDIKLV HSQIPNEAIP NIDMKFKTEE EAYEFYNAYA YKVGFSVRRS KEYKDKRGML  120
VTRIFCCSYK GNRGKINEII YTHLTALR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30211740