PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn157971
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family TCP
Protein Properties Length: 252aa    MW: 25922.9 Da    PI: 4.7167
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn157971genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP43.31.4e-1332763888
         TCP 38 eLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88
                 LG+++d++ti WLl+ a+pai+e+tgt++ +a ++         +++ +++
  Achn157971 32 ALGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVsV-------NGTLKIP 76
                59**************************9999844421.......1111222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.3E-93286IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MASIENQSIE PDDDEINNSH DDLLPPEFTV TALGHKSDGE TIRWLLERAE PAIIEATGTG  60
TVPAIAVSVN GTLKIPTTST AAIDGDTTKK KRKRACNSDF YDVNDSGSSN FAPVAPVTTV  120
TPQGLVPVWA LGGGAGGFVP PSTAVHGGAF FMIPPAVHSN QPQLWAIPAA ATPVFNVSAR  180
PISNFVAASG GGSASSRASG ERKSGKVSTM APSSSSAAPT TTQMLRDFSL EIYDKNELQL  240
MISSGGDPSP S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023753343.12e-84transcription factor TCP19-like
SwissprotQ9LT897e-52TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A2R6RQU21e-152A0A2R6RQU2_ACTCH; Transcription factor like
STRINGMigut.F00395.1.p1e-68(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.21e-49TCP family protein