PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn160261
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 191aa    MW: 21211.7 Da    PI: 4.432
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn160261genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM737.5e-23451671128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 lp G+rF P+d+ +v +yLkk++++++l++ ++i+++++y++  P+++p + + ++ e++wyfF+++ k+++       +t++g Wk+  +d+e+l+ +
  Achn160261  45 LPTGYRFGPSDKTIVIHYLKKEIRNQPLPV-DIIPRTNLYSFgAPEKIPlStSKYGMENHWYFFTTKPKENP------IITSDGCWKEI-RDEEILE-G 134
                 699***************************.99********988*****5333334677*******998765......5899*****87.6799999.9 PP

         NAM  97 gelvglkktLvfy.kgrapkgektdWvmheyrl 128
                 +e+vg  +tL f+ ++  ++  +t+W ++ey++
  Achn160261 135 DEVVGFMRTLRFHyEELLNDEANTNWYIDEYSA 167
                 99**********94555667789********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-2441171IPR003441NAC domain
PROSITE profilePS5100525.05245188IPR003441NAC domain
PfamPF023654.0E-1646166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MASSSSTAAS SAPAPASGSG SASAVAAASS SVNPIEQLNG QTIYLPTGYR FGPSDKTIVI  60
HYLKKEIRNQ PLPVDIIPRT NLYSFGAPEK IPLSTSKYGM ENHWYFFTTK PKENPIITSD  120
GCWKEIRDEE ILEGDEVVGF MRTLRFHYEE LLNDEANTNW YIDEYSANPN IFESDELDDD  180
AKEKVKFMLI *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6Q2G91e-110A0A2R6Q2G9_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.11e-15NAC domain containing protein 53