PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn165251
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NZZ/SPL
Protein Properties Length: 243aa    MW: 26467.7 Da    PI: 9.0695
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn165251genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE27.17.8e-09415143185
      NOZZLE  43 rgrk..pgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrgvvlqgfpsslgs...srilcggvgsgqvmi 136
                 rgr+    s +a qk kk   rgmgva+ler +++e  ++++  ++       +  n  +  p + ++ v    f   l     +   +ggv  gq   
  Achn165251   4 RGRRksKSSDAAVQKVKKQPQRGMGVAQLERLRLQERWNNMTEIGNFPPQ-PLSLHNPYSLSPPSYQNPVSTTQFGHGLNPvlfQNGRVGGVFPGQFQA 101
                 6654114678899**99999*********************887776666.4567777777776777888888888888773333345688889***** PP

      NOZZLE 137 dp..vispwgfvetsat...thelssisnpqmynassnnrcdtcfkkkrldgdq 185
                 dp  + +p   v    +   + el si+n + +   s++      kkkr+dg +
  Achn165251 102 DPygIGAPNPSVRVGNVgepSSELPSIPNLEGF---SDH-YVVYHKKKRVDGKN 151
                 *95445677666655431114688888887766...666.56789******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MQDRGRRKSK SSDAAVQKVK KQPQRGMGVA QLERLRLQER WNNMTEIGNF PPQPLSLHNP  60
YSLSPPSYQN PVSTTQFGHG LNPVLFQNGR VGGVFPGQFQ ADPYGIGAPN PSVRVGNVGE  120
PSSELPSIPN LEGFSDHYVV YHKKKRVDGK NLGCNGMRGK PADLYPIHGC GFQGFNQELE  180
VLAVHRKGIS GVVMEYEFFP ETRGRGTCSN DLELGLSEAS VTTTSSGFDA SNSVDLSLKL  240
SY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QWU11e-173A0A2R6QWU1_ACTCH; Protein SPOROCYTELESS like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1249978