PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn169871
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 253aa    MW: 28602 Da    PI: 9.6555
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn169871genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87e-12173221455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +   +++   Ka iL + ++Y++sLq
  Achn169871 173 SHSLAERVRREKISDRMKLLQSLVPGC---DKQIIGKALILDEIINYVQSLQ 221
                 8**************************...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.62E-8167225No hitNo description
SuperFamilySSF474596.54E-17169240IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.548169220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-16173238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-9173221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-10175226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MTALNSSHHH PPFIVPDSVY VPNTLHKMSC LLEQEMIKTF PCFSPIRPSN YFQESPFMHL  60
HKQDMNGSVE NRNSMKVPVS YIKKQGIDSS SMVGELKTVD QGETQLEKKR KTMGCKVDRV  120
QGKCKKEKKC DGMSRNREDK KVKAETKDKK KANEEAPTGY VHVRARRGQA TDSHSLAERV  180
RREKISDRMK LLQSLVPGCD KQIIGKALIL DEIINYVQSL QSQVEFLVMK IASVYPTIND  240
LDTNIPASEV LP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018832505.15e-60PREDICTED: transcription factor bHLH137-like isoform X1
TrEMBLA0A2R6QQ840.0A0A2R6QQ84_ACTCH; Transcription factor bHLH137 like
STRINGAquca_080_00003.15e-56(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA41162345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-41bHLH family protein