PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn170171
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 189aa    MW: 21846.3 Da    PI: 6.0863
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn170171genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.4e-1574124555
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                 +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN+ L+++l++ ++ 
  Achn170171  74 RKQRRMISNRESARRSRMRKQKHLDELWAQVVRLRNENHNLIDKLNNVSES 124
                 79****************************************999998775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.8E-1670134IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.96772135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-1274147No hitNo description
SuperFamilySSF579591.19E-1274123No hitNo description
PfamPF001702.0E-1274128IPR004827Basic-leucine zipper domain
CDDcd147025.07E-2075126No hitNo description
PROSITE patternPS0003607792IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MLPSEVAAIH YLASDNSSQF PTTFSMMPNN MPPFHFSRFL TQLPNTLHEF TPCLSNNSTS  60
DEAEEQQLNI IDERKQRRMI SNRESARRSR MRKQKHLDEL WAQVVRLRNE NHNLIDKLNN  120
VSESHDRVVQ ENSRLKEEAS DLRQMLTDLQ IGSPYPDLRD LEEVNCNTAH LRSESSDQSI  180
TTSTNLLH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18693RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00647PBMTransfer from LOC_Os02g49560Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027095835.12e-95basic leucine zipper 43-like
SwissprotQ9FMC26e-41BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2R6PB571e-135A0A2R6PB57_ACTCH; Basic leucine zipper like
STRINGXP_009611005.14e-90(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.17e-52basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]