PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn176771
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family GeBP
Protein Properties Length: 260aa    MW: 29992.1 Da    PI: 6.9873
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn176771genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57358.22.4e-18145232897
      DUF573   8 seeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  eeD+ ++L+ +  +  +tg+ ps d  +++efvk+s+ ++vs + l +Ki +L+k+fkk vkk  +g++p+fs++  +++fels++iWg
  Achn176771 145 EEEDDFAILKFIFFYIFSTGVYPSPDSIQLHEFVKNSVGANVSGRLLRDKIMKLRKRFKKIVKK--KGDDPNFSRPLHREMFELSRRIWG 232
                 589*************************************************************..***********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.0E-16146232IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MPREIKNQNG KNVAQKPRIP TTPSSKQPAE KLPDKAAVET EQDPEVLKQH SSFSMSVIDT  60
SSDEETKVTT VITLGDKPTY PLQRKKLVEK DLISEDSYPL DENDPPSSEG FEVEDTWKIT  120
RIYSIKEKTK QPQSQKPLFE KSMSEEEDDF AILKFIFFYI FSTGVYPSPD SIQLHEFVKN  180
SVGANVSGRL LRDKIMKLRK RFKKIVKKKG DDPNFSRPLH REMFELSRRI WGHENNLVEE  240
DEQTKAMIKE QLMKEDALR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QDG41e-152A0A2R6QDG4_ACTCH; STOREKEEPER protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA501437
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-08DNA-binding storekeeper protein-related transcriptional regulator