PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn176781
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family C2H2
Protein Properties Length: 438aa    MW: 47114.9 Da    PI: 9.7198
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn176781genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013204226223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C++Cg+ F  +  L+ H  + H
  Achn176781 204 TCHKCGEQFGKWVALEAHHLSkH 226
                 7*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280205226IPR007087Zinc finger, C2H2
SuperFamilySSF563991.58E-21228436No hitNo description
Gene3DG3DSA:3.90.228.102.1E-7243432IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MPTVWFSLKK SLHCKSEPSD VRDPKARNHL STILTRKARR SGCSRSIANL KDVIHGSKRH  60
MEKPPSCSPR SIGSSEFLNP ITHEVILSNS RCELKISGFG EGLDGSGSGG GGGGGGSTFV  120
GTLRPGTPGP GGHPTMHYFN PSPRASTNQR KTNDASSPWS DREGNGFGGS VISGGANGFG  180
NGNGVFSNPK ASLETDANGL LAVTCHKCGE QFGKWVALEA HHLSKHAVTE LVDGDSSRKI  240
VEIICRTSWL KSENHCGRIE RVLKVHNMQK TLARFEEYRE TVKIKASKLP KKHPRCLADG  300
NELLRFYGTT VACSLGMNGS SSLCVSEKCC VCQIIRNGFN AKKELKGGIG VFTTSTSGRA  360
LQDIEIFKEH PSIKKALIVC RVIAGRVHRP LENIQEMAGQ SGFDSLAGKV GLYSNIEELY  420
LLNPKALLPC FVVICKS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105116SGSGGGGGGGGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010267824.10.0PREDICTED: uncharacterized protein LOC104604941
RefseqXP_010267825.10.0PREDICTED: uncharacterized protein LOC104604941
TrEMBLA0A2R6QDG80.0A0A2R6QDG8_ACTCH; Exodeoxyribonuclease 7 large subunit like
STRINGXP_010267823.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22442235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-170C2H2 family protein