PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn193461
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 246aa    MW: 28018.7 Da    PI: 8.9329
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn193461genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.81.4e-29281472128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                 p G+rF+Pt ++l+++yLk+kv +++l++ +vi e+d ++++PwdLp  +   + + +fF+kr  k  +g+r n + +sg Wk +gk+ +v+++ ++++
  Achn193461  28 PIGYRFDPTSQQLLKYYLKPKVYSRPLPA-QVILEFDAFQTNPWDLPGDC---KGKRFFFCKR--KLGNGRRFNGMSESGCWKVKGKEVRVVDNdSDQV 120
                 89***************************.99***************544...33789**997..55789********************999867778 PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 +g+k++L+f +  +++  k +Wvm+eyrl
  Achn193461 121 IGVKRSLIFCE--KKRHLKHQWVMKEYRL 147
                 **********5..44556*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.5E-3918167IPR003441NAC domain
PROSITE profilePS5100538.57327167IPR003441NAC domain
PfamPF023654.1E-1928147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDGFDKTKFG CELAERPMFV TIGGLKFPIG YRFDPTSQQL LKYYLKPKVY SRPLPAQVIL  60
EFDAFQTNPW DLPGDCKGKR FFFCKRKLGN GRRFNGMSES GCWKVKGKEV RVVDNDSDQV  120
IGVKRSLIFC EKKRHLKHQW VMKEYRLVKS EMGMQLEDWV VCKVYQKPNK SKYRRIRIRA  180
SDSSEESSST SAVDNMEGDG HSSDESPHYY PYISSSSSSS SSSFSSWVSE ISSTDSDQEE  240
TGPPA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A8e-232517013171Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6RJY50.0A0A2R6RJY5_ACTCH; NAC transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA132501318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.17e-30NAC domain containing protein 83