PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn212001
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 180aa    MW: 20530.7 Da    PI: 9.0633
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn212001genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM30.11.4e-09145169125
         NAM   1 lppGfrFhPtdeelvveyLkkkveg 25 
                 lppGfrFhPtdeelv +yLk++ ++
  Achn212001 145 LPPGFRFHPTDEELVGYYLKRREKR 169
                 79******************98665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1585734.03E-1254115No hitNo description
SuperFamilySSF1019413.53E-9140167IPR003441NAC domain
PROSITE profilePS5100514.303145179IPR003441NAC domain
PfamPF023654.3E-7146166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MVDVRSREMP LAFSRMRDYC VMSVIMLIYE LPGGFWPFPS SNINPSTFVA CNGFEEERSL  60
IEDIKDVRFY KIGTGLEVIS QRTTALKLNH LTTMEVNIVR PFLVKALQTF NKLDNPEIQE  120
SEPNRQVPAA NRGPKESEKM VGVALPPGFR FHPTDEELVG YYLKRREKRG GYKRGEGRV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-