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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Achn213191 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
|
| Family |
LFY |
| Protein Properties |
Length: 414aa MW: 45905.4 Da PI: 7.2616 |
| Description |
LFY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Achn213191 | genome | IKGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FLO_LFY | 628.8 | 8.7e-192 | 35 | 399 | 1 | 386 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrl 99
mdp+afsaslfkwdpr +a +p +l e a+++++p r+l +le++f+ayGvry+t+akiaelGftv+tL+dmk+eel+d+m+sls+ifr+
Achn213191 35 MDPDAFSASLFKWDPRGPVAVAP-HL-EAAHAVRPP---------RELGGLEDFFQAYGVRYYTAAKIAELGFTVNTLLDMKEEELEDMMNSLSQIFRW 122
9**************97664444.22.333333444.........6799************************************************** PP
FLO_LFY 100 dllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkk 198
dllvGeryGikaavraerrrl+eee ++rr+lls+d+++aldalsqeglsee+vq+++ a + gg+g g +e+va+ +kk++ +++k +
Achn213191 123 DLLVGERYGIKAAVRAERRRLDEEE--ARRRHLLSADTANALDALSQEGLSEERVQQKEAAGSGGGAGGGGWEVVAVGG----GSKKQQ----RRKKVQ 211
***********************87..99999**********************9885555555666778999999983....223333....333444 PP
FLO_LFY 199 kelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyi 297
+++s +d+d+ ++ +d++++g +g++rqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq++akerGekcPtkvtnqvfryakkagasyi
Achn213191 212 ARMASFDDDDDVSDGGDDDDNGGGRGDHRQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQSVAKERGEKCPTKVTNQVFRYAKKAGASYI 310
4445556777777777888888888************************************************************************** PP
FLO_LFY 298 nkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerskas 386
nkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawr+acy+plvaiaarqgwdid++fnahprL++WYvPtkLrqLCh+e+s+a+
Achn213191 311 NKPKMRHYVHCYALHCLDEEASNALRRAFKERGENVGAWRHACYNPLVAIAARQGWDIDSIFNAHPRLAVWYVPTKLRQLCHAEHSSAA 399
************************************************************************************99875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MDAKRRLRSG LPSLHVPHNS STAQSGIGSD ILRDMDPDAF SASLFKWDPR GPVAVAPHLE 60
AAHAVRPPRE LGGLEDFFQA YGVRYYTAAK IAELGFTVNT LLDMKEEELE DMMNSLSQIF 120
RWDLLVGERY GIKAAVRAER RRLDEEEARR RHLLSADTAN ALDALSQEGL SEERVQQKEA 180
AGSGGGAGGG GWEVVAVGGG SKKQQRRKKV QARMASFDDD DDVSDGGDDD DNGGGRGDHR 240
QREHPFIVTE PGEVARGKKN GLDYLFHLYE QCREFLIQVQ SVAKERGEKC PTKVTNQVFR 300
YAKKAGASYI NKPKMRHYVH CYALHCLDEE ASNALRRAFK ERGENVGAWR HACYNPLVAI 360
AARQGWDIDS IFNAHPRLAV WYVPTKLRQL CHAEHSSAAT PTSVSSGPEH LPF*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | May regulate indeterminacy during leaf and flower development. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF181663 | 1e-122 | AF181663.1 Actinidia deliciosa leafy/floricaula homolog mRNA, partial cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT5G61850.1 | 1e-105 | floral meristem identity control protein LEAFY (LFY) |
