PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn214401
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 156aa    MW: 17739.9 Da    PI: 6.354
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn214401genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.5e-082331245
                     HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     l++a+ + G++ W+ I + ++ g t++++k++w+
       Achn214401  2 LIEAHMEVGNK-WTEITKQIQ-GWTENSIKNHWN 33
                     89*********.*********.***********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.75E-7142IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.7E-9134IPR009057Homeodomain-like
CDDcd001671.62E-4136No hitNo description
PROSITE profilePS5129414.002140IPR017930Myb domain
PfamPF002491.3E-6233IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MLIEAHMEVG NKWTEITKQI QGWTENSIKN HWNATKRRQN SKRKDLSEPS IADSPKFVNH  60
THDNNKAIVK EENSQGDQDG ILLFMNNTPK EVLPKTHLSS DLYLSYLLDR PASSASKDYY  120
YDSMNVDSMA CEASSSGKKN MELMEMVALL SSPWW*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PQ021e-56A0A2R6PQ02_ACTCH; Transcription factor like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48251941
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11050.11e-18myb domain protein 64