PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn227931
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 220aa    MW: 25477 Da    PI: 10.4985
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn227931genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2378.5e-1296137351
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                  +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  Achn227931  96 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 137
                 79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-495152IPR001471AP2/ERF domain
PfamPF008475.0E-695138IPR001471AP2/ERF domain
SuperFamilySSF541714.32E-896140IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.3E-698142IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MVSIRRRRLL GLCSGKNSFL SPLHKFFVNG NPPENPSQRA RPVSVHPMPS LEAEQTEEPM  60
PIFLYNFRLR TKTVPEVKRR KRHRRKHFEN QEPCLMRGVY FKNMKWQAAI KVDKKQIHLG  120
TVGSQEEAAR LYDRAAFMCG REPNFELSEE EKHELRKFKW DEFLAVTRSA ITNKKQRRRG  180
GAVSRRKTEP SVQNSEWEGE EGVNGFSASE DMEAETSVS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028062416.11e-103ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A2R6QJQ61e-133A0A2R6QJQ6_ACTCH; Ethylene-responsive transcription factor-like protein
STRINGPOPTR_0002s24750.42e-95(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.12e-47ERF family protein