PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn229031
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 320aa    MW: 35871.6 Da    PI: 5.8502
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn229031genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.25.4e-52141411128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 
                 + pGfrFhPtdeelv +yLkkk+++++l++ e ik+vdiyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++
  Achn229031  14 MLPGFRFHPTDEELVGFYLKKKIQQHSLPI-ELIKQVDIYKYDPWDLPKLAPTGEKEWYFYCPRDRKYRNSVRPNRVTGAGFWKATGTDRPIYSSdGSK 111
                 579***************************.89***************9888999***************************************96667 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +glkk+Lvfy+gra kg ktdW+mhe+rl
  Achn229031 112 CIGLKKSLVFYRGRAAKGFKTDWMMHEFRL 141
                 7***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100551.96914156IPR003441NAC domain
SuperFamilySSF1019415.23E-5514143IPR003441NAC domain
PfamPF023651.7E-2516141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MDEKSDADKI DDIMLPGFRF HPTDEELVGF YLKKKIQQHS LPIELIKQVD IYKYDPWDLP  60
KLAPTGEKEW YFYCPRDRKY RNSVRPNRVT GAGFWKATGT DRPIYSSDGS KCIGLKKSLV  120
FYRGRAAKGF KTDWMMHEFR LPSISDSSAP KKFLDKNLPV NTISCTTETA SFSALDIPSD  180
KPMNPVACKP SPFSIPNKDL STGYTFSPLE MPGPTTINTL DVASVLFNLS PTLNEDVSRA  240
SQSIDFEEPQ QPVNVFSLGS PQDMQGGTRE DDMGLRKYAS AARASDEWGN IRSIVFPFSL  300
SSDLPDAWKP NLPWDSPLS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-4911411140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028058869.11e-163protein FEZ-like
RefseqXP_028080503.11e-163protein FEZ-like
TrEMBLA0A2R6RKA90.0A0A2R6RKA9_ACTCH; Protein FEZ like
STRINGAquca_002_00586.11e-137(Aquilegia coerulea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22022262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.17e-90NAC domain containing protein 94