PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn251051
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 215aa    MW: 24135.2 Da    PI: 6.0812
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn251051genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.83.2e-11721171759
                 T-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  17 gsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 g +  rsYYrCt++    C+++k+v++ +edp + ++tY g+H+++
  Achn251051  72 GCRKRRSYYRCTHKhdqCCKATKQVQTIQEDPPMYQTTYFGHHTCK 117
                 66778********9887799************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081111.33651114IPR003657WRKY domain
SMARTSM007744.5E-1071118IPR003657WRKY domain
PfamPF031066.5E-1272117IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-1072118IPR003657WRKY domain
SuperFamilySSF1182908.11E-1172118IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MEKLVMGRDW AAQLQILLRK PTGLDGPGTA DELAVKILRS FTETLSALNS GDVDQIDSGE  60
SRQTQATTAR RGCRKRRSYY RCTHKHDQCC KATKQVQTIQ EDPPMYQTTY FGHHTCKHHT  120
LVASQANSDS HPLQGSHNNL LSFESKSPIS SPKLEKPYKE EAQESIVWPD MMPLDVTYGV  180
CSSKLTSFCG LDMDFLVESV DLESCFCFDE MEFL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028052697.14e-44WRKY DNA-binding transcription factor 70-like
RefseqXP_028083248.14e-44WRKY DNA-binding transcription factor 70-like
TrEMBLA0A2R6RWK61e-149A0A2R6RWK6_ACTCH; WRKY transcription factor 70
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.18e-10WRKY DNA-binding protein 70