PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn251821
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 254aa    MW: 28415.7 Da    PI: 6.3648
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn251821genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.34.4e-1077120548
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                 ++ rr+++NReAAr+sR+RKka++++Le    +L++  ++L+  
  Achn251821  77 QALRRLAQNREAARKSRLRKKAYVQQLEHSRMKLTQLEQELQRA 120
                 6789************************9888888887766432 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.3E-969132No hitNo description
SMARTSM003388.5E-671138IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.82975124IPR004827Basic-leucine zipper domain
PfamPF001708.0E-878122IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.06E-779124No hitNo description
PROSITE patternPS0003608095IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MPLKRGYDSA RNQTRFADIG ELEQPAVGFH QDDAVDLSRS GSSGNNGNFE NWGDSGMGEH  60
SQQTDTSTDV DTDDRNQALR RLAQNREAAR KSRLRKKAYV QQLEHSRMKL TQLEQELQRA  120
RQQILENQLE PLTDQQLMGI CNLQQSSQQA EDALSQGMEA LQQSLVETLS SNCLGPTGSG  180
NVADYMGQMA IAMGKLATLE NFLHQADLLR QQTLQQMHRI LTTRQAARAL LVISDYMTRL  240
RALSSLWLAR PKD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028084521.12e-80transcription factor TGA2.3-like isoform X3
RefseqXP_028102203.12e-80transcription factor TGA2.3-like
SwissprotQ415587e-64HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A3Q8TD580.0A0A3Q8TD58_ACTDE; Basic leucine zipper protein 1
STRINGVIT_01s0011g03230.t015e-79(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1645924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.12e-51bZIP family protein