PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn254041
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 341aa    MW: 38693.9 Da    PI: 4.7214
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn254041genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.86.3e-2161272128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
                 p+Gf F+Ptd+e++++yL kk  g++l+l+ vi+e d+y+ e   L + ++++e+++yfF++ +kk+ +g+++ r++ +++W++   d + l+ ++  +
  Achn254041   6 PVGFLFRPTDKEVIKHYLLKKQIGEELPLNGVIQERDVYSEE--VLSEVFQSSETHVYFFTQFKKKSLNGSNHDRTMGKATWRSESVDDSRLD-EKMII 101
                 89***************************99********987..67777889999********************************999999.8999* PP

         NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                 g k+ L +   +  +    dW m+e++l
  Achn254041 102 GKKRLLDYI--NPGSVGDRDWNMKEFSL 127
                 ******999..34444578*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-213148IPR003441NAC domain
PROSITE profilePS5100524.8185149IPR003441NAC domain
PfamPF023651.4E-126127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MAITFPVGFL FRPTDKEVIK HYLLKKQIGE ELPLNGVIQE RDVYSEEVLS EVFQSSETHV  60
YFFTQFKKKS LNGSNHDRTM GKATWRSESV DDSRLDEKMI IGKKRLLDYI NPGSVGDRDW  120
NMKEFSLDGV LLELPKTSSD YVVCLLEKKE RAIKRDRQKN MQSKRNAPVN TPSGCFNNKK  180
IKLSSKQNQQ MENRQTESAP LVDEQVGLIT GEAGVKTLEQ IMQYLLELDL SMWPPTPWQG  240
YRLLLAASYD LSECTSMPPL VEDKPAATVD EEGGCTSRKQ EIRMLLVEKS HWEYQPSIAA  300
PESQADDAVM DSIILLSTTV EGFAEDFIED FVDQFLNGNS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6QPD50.0A0A2R6QPD5_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-15NAC domain containing protein 32