PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn254051
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 199aa    MW: 22924.8 Da    PI: 7.4991
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn254051genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.83.2e-1761302128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk....k 96 
                   G++F+Ptd+el+++yL +k+ g++l+++ +i + d+y+ + ++ +  v +e+++ yfF++ +kk  +g+   r++ +g+W+ + + + + +     +
  Achn254051   6 LEGLKFRPTDQELINDYLFNKIIGNELPFDGIILKRDVYDQHDENGD--V-SEDTQSYFFTRLKKKIVNGETYCRTVGNGTWRFQYS-RVINADeyddE 100
                 68***************************999**********99986..3.47899***************************7765.44444445546 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 +  + +k+   +   ++ + ++ +W++  ++l
  Achn254051 101 SIPIRIKRRSEYI--DSGSVQHKNWIIMKFSL 130
                 677999***9999..455556899*9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-174151IPR003441NAC domain
PROSITE profilePS5100522.2615152IPR003441NAC domain
PfamPF023654.0E-108130IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MAKRLLEGLK FRPTDQELIN DYLFNKIIGN ELPFDGIILK RDVYDQHDEN GDVSEDTQSY  60
FFTRLKKKIV NGETYCRTVG NGTWRFQYSR VINADEYDDE SIPIRIKRRS EYIDSGSVQH  120
KNWIIMKFSL AGISLEHPLS SKDYVICRLQ KSRGGKHGDE APVNTPSGCF NNKRIKLPSK  180
QNQQMENQQT ESALLVDE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6S1Y41e-124A0A2R6S1Y4_ACTCH; Phosphate transporter like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.24e-12NAC domain containing protein 50