PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn276021
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 185aa    MW: 21244.4 Da    PI: 9.6687
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn276021genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.22.2e-2161282128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 p+Gf+F+Ptd++l+++yL +k+ gk+l++e +i e d+y+ +   L +      ++++++ yfF++ +kk+a   +  r++ +g+W+++ + + + + +
  Achn276021   6 PAGFKFRPTDQQLIHDYLFNKIVGKELPFEGIILERDVYDEQV--LSQifrsWDESGDTRSYFFTRLKKKAA---NYCRTVGNGTWRSQYS-RVINDGE 98 
                 89***************************999******98754..4322222334577799******99987...5889999*****8866.8888889 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++++g+k+++ + k  + + ++ +W+m e++l
  Achn276021  99 SNTIGIKHSFEYMK--SGSVQHKKWIMMEFSL 128
                 99**********95..55556899******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.71E-204130IPR003441NAC domain
PROSITE profilePS5100521.7395165IPR003441NAC domain
PfamPF023657.0E-166128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MAKSIPAGFK FRPTDQQLIH DYLFNKIVGK ELPFEGIILE RDVYDEQVLS QIFRSWDESG  60
DTRSYFFTRL KKKAANYCRT VGNGTWRSQY SRVINDGESN TIGIKHSFEY MKSGSVQHKK  120
WIMMEFSLAG VLLEQPRSVS SLFMHAYHVG FGFEMGGVIC DLYVKNKTSL LGKNQILKTQ  180
RHEP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PEF37e-89A0A2R6PEF3_ACTCH; NAC domain-containing protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-14NAC domain containing protein 57