PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn279821
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 233aa    MW: 24846.5 Da    PI: 4.6597
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn279821genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.48.7e-15167211448
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                  +++rr++kNRe+A rsR+RK+a++ eLe  v +Le+eN +L  e
  Achn279821 167 QQKQRRMIKNRESAARSRERKQAYTVELEALVTQLEEENARLLRE 211
                 689************************************998654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-9164228IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749166211IPR004827Basic-leucine zipper domain
PfamPF001708.2E-13166211IPR004827Basic-leucine zipper domain
CDDcd147071.96E-20168210No hitNo description
Gene3DG3DSA:1.20.5.1701.5E-13169211No hitNo description
SuperFamilySSF579591.56E-10169211No hitNo description
PROSITE patternPS000360171186IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    Send to blast
MSTTSPANPD LPRQSSIHSL HGDHSKSFGS MNMDELLRNI YGDAFPDSAD ETGVAGAVDG  60
GGGVSQEPEM TLEDFLTKAG AVSEEDVRIP GVPQPPLRFV TDSILNSAQF QANPSGPGGY  120
GVDSAGFGGE IEGGMVAVAS AGGGGGGGVG RGKRKAVEEP QMDKATQQKQ RRMIKNRESA  180
ARSRERKQAY TVELEALVTQ LEEENARLLR EEYEAGRLLI QTERKQEREV WV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028078066.18e-88ABSCISIC ACID-INSENSITIVE 5-like protein 7
TrEMBLA0A2R6RGQ11e-151A0A2R6RGQ1_ACTCH; G-box-binding factor like
STRINGXP_004158618.18e-52(Cucumis sativus)
STRINGXP_009615514.12e-51(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27712452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-14G-box binding factor 4