PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn283551

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bHLH

Protein Properties

Length: 199aa MW: 21190.8 Da PI: 7.639

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn283551	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19	2.5e-06	95	118	8	30
HHHHHHHHHHHHHHHHHCTSCC.C CS HLH 8 rErrRRdriNsafeeLrellPk.a 30 Er RR+++++ f++L llP+ + Achn283551 95 TERERRKKMRNMFSNLHALLPQlP 118 6*********************44 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	8.14E-7	88	120	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.9E-5	90	117	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.18E-5	92	144	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
MSEVGSHETF LWDTQSWAFS NSDNSGGTDE KSGGRPPDSG SNTQTPIGKE AAGAAGGKKK 60 SGGSKKGGGS GELSEGKCGG GGGGGESDHE IHIWTERERR KKMRNMFSNL HALLPQLPPK 120 ISVCAPKKLG LFTAICYLME KHKLDVVSAH VSSSDQNRTM FMIQAHARIA SDQIPEAFPV 180 EEIYKQAAGE IMLWISQS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028064501.1	1e-43	transcription factor bHLH95-like
TrEMBL	A0A2R6RH20	7e-52	A0A2R6RH20_ACTCH; Transcription factor bHLH95 like
STRING	VIT_03s0063g00170.t01	2e-35	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1324	23	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	1e-16	bHLH family protein