PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn284031
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family MYB_related
Protein Properties Length: 304aa    MW: 34311 Da    PI: 4.6498
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn284031genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-0849722448
                     HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                     W++Ia +++ gRt++++k++w+++l
       Achn284031 49 WSLIAGHLP-GRTDNEIKNYWNSHL 72
                     *********.************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.94E-74777IPR009057Homeodomain-like
PROSITE profilePS500906.4814972IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.9E-124972IPR009057Homeodomain-like
CDDcd001671.21E-54972No hitNo description
PfamPF002492.4E-64972IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAQMSYRNKF KEKGQNDGRM KIHEYVRWNP LHEALYGVEP TREGFAMWWS LIAGHLPGRT  60
DNEIKNYWNS HLSRKISSFS QPCSEHSFPP PAVVDSAKSR VTPRRRGSQT SRTAMKKNKI  120
NFHTKVQKFT EKPQENGFAT GPVPNLETET LSSANSSVSL PRSCHNPIGE MSEERESEML  180
CFHDIMGDEL VDPQGFMVLG EERESAAAGV EVEERECEAA KLATSEDLES VNLSSNGESG  240
NELHSFSSKD WDLDWDLDWD AVVQGQDLWG EDEKMMAWLW GSDDGMGESN NEKQEAMISW  300
LLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028058990.12e-59myb-related protein Zm38-like
TrEMBLA0A2R6P5S21e-154A0A2R6P5S2_ACTCH; Transcription factor like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.11e-16myb domain protein 12