PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn302861
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 207aa    MW: 23266.1 Da    PI: 5.1092
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn302861genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.35.1e-152169356
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                y GVr  ++ grWv+eIr p++   ++r++lg++ ++e+Aa+a++aa  +l+ge
  Achn302861 21 YAGVR--SRGGRWVSEIRIPKT---KTRIWLGSHHSPEKAARAYDAALYCLKGE 69
                78995..779*********954...5*************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.9371476IPR001471AP2/ERF domain
SMARTSM003801.8E-212082IPR001471AP2/ERF domain
PfamPF008472.2E-72169IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-142177IPR016177DNA-binding domain
CDDcd000182.86E-212178No hitNo description
Gene3DG3DSA:3.30.730.101.5E-212177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MDLGPTLTLQ KGRQRRGKGP YAGVRSRGGR WVSEIRIPKT KTRIWLGSHH SPEKAARAYD  60
AALYCLKGEH GSFNFPNNRR PYLANRSVGS LPVDEIQFIA AEFSCFDDSA ATSEPFPMSP  120
LMETHLSSEP PVTPDPQNVN EMEANNVDAE PYFPAFMQEE EPHVPTFVPE EPYIPAYVRE  180
AAPILHGDLL LDEWLTLDGD WMRNFH*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6R4121e-152A0A2R6R412_ACTCH; Ethylene-responsive transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1877423
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-33ERF family protein