PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn309591
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family ERF
Protein Properties Length: 247aa    MW: 27095.2 Da    PI: 10.9119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn309591genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.6e-21109159256
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                 +y+GVr ++ +grW AeIrd +   g r r++lg+f+taeeAa+a++aa+++l+g+
  Achn309591 109 CYRGVRKRP-WGRWSAEIRDrV---G-RCRHWLGTFDTAEEAARAYDAAARRLRGA 159
                 8********.**********55...2.59*************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.352109166IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-22109166IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.0E-29109166IPR001471AP2/ERF domain
PfamPF008472.6E-14109158IPR001471AP2/ERF domain
SMARTSM003808.0E-31109172IPR001471AP2/ERF domain
CDDcd000181.99E-15110165No hitNo description
PRINTSPR003679.2E-11110121IPR001471AP2/ERF domain
PRINTSPR003679.2E-11132148IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MNHPPLQQIP FIPRPDPFLF KPTQTFPRLT EFPLVCYEQP LFPSSLSFSN NNPPDHIPEA  60
PTVLEGIAAV VGQHVLFGKG DKPGGDSVTH RVCPGQPERE KVVVTVQKCY RGVRKRPWGR  120
WSAEIRDRVG RCRHWLGTFD TAEEAARAYD AAARRLRGAK ARTNFTIPPV LPLLSPSSSS  180
SSVAKKKKTR GKAALQNRLK CAVVTSVGQL FRNPITHTSR PPVELDLKLG ASFSHSSSMA  240
LLSTAS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-161101651571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028067687.13e-63ethylene-responsive transcription factor ERF084-like
TrEMBLA0A2R6QFY21e-180A0A2R6QFY2_ACTCH; Ethylene-responsive transcription factor
STRINGXP_004305488.13e-55(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.12e-22ERF family protein