PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn319671
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 121aa    MW: 14222.4 Da    PI: 6.8923
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn319671genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.18.1e-1146119183
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyW 83 
                 +p Gfr +P+d+e++ + L +k++g++++++e+ i+e  +  k ePw++           yfFsk +k+       +r  +tk+gyW
  Achn319671  46 VPYGFRLNPKDQEII-YLLLRKMNGNRIPVDEAlIEERdQFGKEEPWEIF--------GSYFFSKLKKNLD----VSRlwTTKEGYW 119
                 589************.9999********9999889999457788*****5........46****9988653....333347999*** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.85E-1038119IPR003441NAC domain
PROSITE profilePS5100515.23946120IPR003441NAC domain
PfamPF023651.2E-647119IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MWWWSLQMLI FPPPSRNVDF AVSGGGALVK PQMEETRNAD RMAFTVPYGF RLNPKDQEII  60
YLLLRKMNGN RIPVDEALIE ERDQFGKEEP WEIFGSYFFS KLKKNLDVSR LWTTKEGYWI  120
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6RH718e-32A0A2R6RH71_ACTCH; NAC domain-containing protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13708311
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.16e-08NAC domain containing protein 28