PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn336631
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 217aa    MW: 23962.4 Da    PI: 4.3198
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn336631genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.1e-061061263555
                 TS-STCHHHHHHHHHHHHHHH CS
         HLH  35 skKlsKaeiLekAveYIksLq 55 
                 + K +Ka++L +A+eY+k+Lq
  Achn336631 106 DCKTDKASMLDEAIEYLKQLQ 126
                 6799****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.109.7E-8101136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.87E-5106130No hitNo description
SuperFamilySSF474591.44E-7106142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MADRYGTKSR SSSLESEEDM SSLLRNLLHN SFTSLPSSSS TSFNDQYKQS LSSPPPPLEI  60
FSQSGFRIRE GTSNSGSSVM VQSSTDFKFS DLEESTRNTS DDIGFDCKTD KASMLDEAIE  120
YLKQLQLQVQ MLSMRNGLSL NDLLLLGSLR PTQTELLNTK GGEDTFSGNQ EIWMRTSFDL  180
PNQCTPSNQQ NLTSPAKNIT SSETSLGLEP SIQNYY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028080409.18e-55transcription factor SPATULA-like
TrEMBLA0A2R6QY261e-96A0A2R6QY26_ACTCH; Transcription factor SPATULA like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.14e-11bHLH family protein