PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn357291
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NZZ/SPL
Protein Properties Length: 259aa    MW: 28024.8 Da    PI: 7.2443
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn357291genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE23.21.2e-07212355185
      NOZZLE  55 kqkkptlrgmgvaklerfiieeekkklvvatvgdtssvaaisntatrlpvpvdrgvvlqgfpsslgssrilcggvgsgqvmidpv.ispwgfv..etsa 150
                 k+kkp  rgmgva+ler +++e   k++  +    s    ++ +   +p   ++ ++l  +      +  +cg  g g ++ d v + p+g    +   
  Achn357291   2 KKKKPPQRGMGVAQLERLRLQERWAKMALNNSPLQS---LSPYDHPFYP--TNQALLLPRLA-----NGQFCGP-GFGGLVSDTVrLDPYGVGapNPDK 89 
                 789************************987765555...4455555555..78888776543.....3445653.444455555535666654115667 PP

      NOZZLE 151 tthelssisnpqmynassnnrcdtcfkkkrldgdq 185
                 t+ elss++  ++y    +     c k kr++g++
  Achn357291  90 TSRELSSMPTMRFYPDGPDP-WGLCHKEKRVNGED 123
                 889********999988877.89*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MKKKKPPQRG MGVAQLERLR LQERWAKMAL NNSPLQSLSP YDHPFYPTNQ ALLLPRLANG  60
QFCGPGFGGL VSDTVRLDPY GVGAPNPDKT SRELSSMPTM RFYPDGPDPW GLCHKEKRVN  120
GEDLGYHGMR AVNGDPSKVN GCDFLGFNLG NSPNIGGENG ELGKREPSQA SFSCSNGDQE  180
VEVVGVKRKN LRVESVIMEY EFFPRQCGRG PSPNELDLEA SVAVCVGDPL SGGLSLMTPT  240
SSCFDASKSI DLSLKLSC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PRE20.0A0A2R6PRE2_ACTCH; Protein SPOROCYTELESS like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1249978
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27330.12e-06sporocyteless (SPL)