PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn360351
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 183aa    MW: 20670.7 Da    PI: 4.1845
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn360351genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.21.2e-1120532759
                E-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY 27 Ctsa.gCpvkkkversaedpkvveitYegeHnhe 59
                C+++ gC++kk+ver++ d ++++itY+++Hnh+
  Achn360351 20 CSTSkGCSAKKQVERCRADASMLIITYTSTHNHD 53
                77666****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081115.629855IPR003657WRKY domain
SMARTSM007746.4E-61454IPR003657WRKY domain
Gene3DG3DSA:2.20.25.807.7E-122055IPR003657WRKY domain
PfamPF031061.4E-82053IPR003657WRKY domain
SuperFamilySSF1182904.18E-92055IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MDCLVDSQGG PHSGQPIKTC STSKGCSAKK QVERCRADAS MLIITYTSTH NHDLPITKPS  60
KEEPQIKPTT TPKEEDEEEE TDEYQKCEED QFHYSQSPFN NSEDIIVINQ QYPFAEENVL  120
VDEEPLCCYH QPSPPPLTAL SALKSEENDH FYDELEELVL PSSSSSFLRT DFFDERILIH  180
PS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028117815.12e-41probable WRKY transcription factor 35
TrEMBLA0A2R6P5M81e-113A0A2R6P5M8_ACTCH; WRKY transcription factor
STRINGPOPTR_0014s11490.13e-39(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112812025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.13e-13WRKY DNA-binding protein 14