PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn361761
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bHLH
Protein Properties Length: 269aa    MW: 30081.4 Da    PI: 7.7735
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn361761genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.55.7e-0971121355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                   h  +Er+RR+++      Lr+llP       +++ s ++  ++Av+YI++Lq
  Achn361761  71 IIHRDVERQRRQEMAALNRSLRSLLPLeH---VKGRRSMSDNMQEAVNYISHLQ 121
                 5699***********************66...9********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.0368120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.26E-1169140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.18E-769125No hitNo description
PfamPF000104.0E-672121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-972145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MGRLINDRIL TSETTASSPE NLFVIRIQED TLLVTPSLCN GDITGEPGNS RRRKSPVDQD  60
DTPLDYKIKK IIHRDVERQR RQEMAALNRS LRSLLPLEHV KGRRSMSDNM QEAVNYISHL  120
QKRVEELRAK RDELKNTSDQ VTERGESTCL TSCVQESVAV EASRAGVRVI VRTPLSGGVS  180
VSRVLDLLLR EGLVVVSCVS TNLEERSLHS IESEVLLVDS LNATGVRARI FVFLSQCNFN  240
HTGLSGILKL YECQVIILWL GVCWDRGN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954SRRRKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6PI261e-143A0A2R6PI26_ACTCH; Transcription factor bHLH120 like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.19e-25bHLH family protein