PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn372231
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family FAR1
Protein Properties Length: 135aa    MW: 15526.4 Da    PI: 4.6772
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn372231genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.91.6e-084195148
        FAR1  1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk......t 48
                k+Y++Y+++ GF  r+++s+k+ +r + +t+  +vC kegk+ ++++k      +
  Achn372231 41 KYYEDYGRQNGFCFRTRTSSKRqNRLDDMTSMLLVCAKEGKNVPKTEKngmegnD 95
                69**********9988776665367788**************9999885555431 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-64198IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MEESFGDDFE VEDMQTLNND VEKIEAQSNG MSFETIEEAR KYYEDYGRQN GFCFRTRTSS  60
KRQNRLDDMT SMLLVCAKEG KNVPKTEKNG MEGNDERAKD DKVVKYYRKK EKEVVQLLNV  120
DATLICRLSV INGV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008219733.25e-20PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2R6R5G63e-32A0A2R6R5G6_ACTCH; Protein FAR1-RELATED SEQUENCE like
STRINGEMJ101655e-19(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.14e-06FAR1-related sequence 7