PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn374841
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 135aa    MW: 15087.9 Da    PI: 8.9885
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn374841genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.81.4e-10113134122
                 ---SS-EEEEEEE--TT-SS-E CS
        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                 +dDg++WrKYG+K+vk+s++pr
  Achn374841 113 MDDGFKWRKYGKKMVKNSPNPR 134
                 69*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.3E-11101134IPR003657WRKY domain
SuperFamilySSF1182908.5E-9105134IPR003657WRKY domain
PROSITE profilePS5081113.161108134IPR003657WRKY domain
PfamPF031063.9E-6114134IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
MMIGMDHHHH LQKPNPNSTH LTGNIDTWLD FEVEDYLVLD DGSEESFSSQ NMASSDNVTG  60
SFELASAGAT SANISNMQVI IHTSKRKNGV KRRKPDHAGV RVAFRTKSEL EVMDDGFKWR  120
KYGKKMVKNS PNPR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028125074.17e-44probable WRKY transcription factor 51 isoform X1
TrEMBLA0A2R6RJQ52e-91A0A2R6RJQ5_ACTCH; WRKY transcription factor 51
STRINGPOPTR_0007s06720.16e-31(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21242462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.12e-17WRKY DNA-binding protein 50