PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn384971

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

SAP

Protein Properties

Length: 103aa MW: 10938.1 Da PI: 5.6957

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn384971	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	67.7	1.8e-21	2	70	6	78
SAP 6 ssssseseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfq 78 sssss++++g g+g +++ ++egpsssr+ra + wpeP++eala++vaida+rs+Grl aa+al n+fq Achn384971 2 SSSSSQNGDG---GNGRGRG-RDFEGPSSSRRRAGGDNWPEPIVEALASHVAIDAARSFGRLDAAPALCNLFQ 70 3333344443...4444444.69*************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 103 aa Download sequence Send to blast
MSSSSSQNGD GGNGRGRGRD FEGPSSSRRR AGGDNWPEPI VEALASHVAI DAARSFGRLD 60 AAPALCNLFQ RIREAPFFVI AEFRADEISV GCLVESFFHA PL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020416111.1	2e-18	LOW QUALITY PROTEIN: transcriptional regulator STERILE APETALA
TrEMBL	A0A314ZN71	1e-19	A0A314ZN71_PRUYE; Uncharacterized protein
TrEMBL	A0A438DQ39	5e-19	A0A438DQ39_VITVI; Uncharacterized protein
STRING	VIT_12s0057g00910.t01	1e-19	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15887	5	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	2e-06	SAP family protein