PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn384981

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

SAP

Protein Properties

Length: 408aa MW: 45565.7 Da PI: 8.9222

Description

SAP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn384981	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SAP	551	4.2e-168	42	407	89	455
SAP 89 sdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstfl 187 s + ltr++W+r +ll++tWr+eyi+rhrtarnf trry+y tl f+ + ++ ++a alsCr+lalsd++laaG++dG+vrlf+l +h+ tf+ Achn384981 42 SFSCIKTLTRQVWNRHHLLHNTWRDEYIFRHRTARNFLTRRYAYATLPFNVSPDHD-DNAAALSCRRLALSDHHLAAGYSDGSVRLFHLPLGIHLYTFR 139 5556789*****************************************986555.5779********************************** PP SAP 188 pqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsl 286 p+ rd lG fsravsGiv+sd++lvfa+ +Gdihva + aa+ rr +lGd v+dG+lvdf+G++rWwvGlyaG pGraf++ da+teel+fvGG l Achn384981 140 PHPRDCLGLFSRAVSGIVLSDTSLVFASQHGDIHVALTNN--AAPVRRSHLGDAVSDGVLVDFCGCNRWWVGLYAGGPGRAFQVRDAHTEELIFVGGGL 236 *********************************999..78*************************************************** PP SAP 287 tdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrg. 384 tdP+av GWh+l++lte+vGrvrvt++e+avaCt++r++v+dl n+g vl+++e +rGliv+s+da ++a+v+vd rG+a+vrr+++lee+c f+vrg Achn384981 237 TDPDAVNGWHLLNDLTEFVGRVRVTSEESAVACTRVRVIVLDLANPGFVLGQQEIQRGLIVGSVDARDSAFVTVDGRGIARVRRANTLEELCGFHVRGv 335 *********************************************************************************************98 PP SAP 385 ..aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455 aqr+vlgC+n+gyal++aggv+r+Wei++ + yly lrer+g++ a+vaddr+va+s+sd+++hl++fg+q Achn384981 336 srAQRRVLGCMNTGYALMCAGGVIRAWEIDHGG-YLYRLRERIGDATAFVADDRYVAASTSDNSVHLWNFGVQ 407 889***********************966.***********************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF50998	5.26E-10	94	404	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
Gene3D	G3DSA:2.130.10.10	3.1E-7	96	182	IPR015943	WD40/YVTN repeat-like-containing domain
Gene3D	G3DSA:2.130.10.10	2.2E-4	307	404	IPR015943	WD40/YVTN repeat-like-containing domain
PROSITE pattern	PS00678	0	390	404	IPR019775	WD40 repeat, conserved site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence Send to blast
MYYQDILNPL LFDIPSSRRI KRRNGSQGIR IVLEDQKPRY RSFSCIKTLT RQVWNRHHLL 60 HNTWRDEYIF RHRTARNFLT RRYAYATLPF NVSPDHDDNA AALSCRRLAL SDHHLAAGYS 120 DGSVRLFHLP LGIHLYTFRP HPRDCLGLFS RAVSGIVLSD TSLVFASQHG DIHVALTNNA 180 APVRRSHLGD AVSDGVLVDF CGCNRWWVGL YAGGPGRAFQ VRDAHTEELI FVGGGLTDPD 240 AVNGWHLLND LTEFVGRVRV TSEESAVACT RVRVIVLDLA NPGFVLGQQE IQRGLIVGSV 300 DARDSAFVTV DGRGIARVRR ANTLEELCGF HVRGVSRAQR RVLGCMNTGY ALMCAGGVIR 360 AWEIDHGGYL YRLRERIGDA TAFVADDRYV AASTSDNSVH LWNFGVQ*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence Send to blast

MYYQDILNPL LFDIPSSRRI KRRNGSQGIR IVLEDQKPRY RSFSCIKTLT RQVWNRHHLL  60
HNTWRDEYIF RHRTARNFLT RRYAYATLPF NVSPDHDDNA AALSCRRLAL SDHHLAAGYS  120
DGSVRLFHLP LGIHLYTFRP HPRDCLGLFS RAVSGIVLSD TSLVFASQHG DIHVALTNNA  180
APVRRSHLGD AVSDGVLVDF CGCNRWWVGL YAGGPGRAFQ VRDAHTEELI FVGGGLTDPD  240
AVNGWHLLND LTEFVGRVRV TSEESAVACT RVRVIVLDLA NPGFVLGQQE IQRGLIVGSV  300
DARDSAFVTV DGRGIARVRR ANTLEELCGF HVRGVSRAQR RVLGCMNTGY ALMCAGGVIR  360
AWEIDHGGYL YRLRERIGDA TAFVADDRYV AASTSDNSVH LWNFGVQ*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028093942.1	1e-170	transcriptional regulator STERILE APETALA
Swissprot	Q9FKH1	1e-138	SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBL	A0A2R6PUK2	0.0	A0A2R6PUK2_ACTCH; Transcriptional regulator STERILE APETALA like
STRING	XP_009596786.1	1e-156	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4099	23	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35770.1	1e-133	SAP family protein

Publications ? help Back to Top
Li N, et al. STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana. PLoS Genet., 2018. 14(2): p. e1007218 [PMID:29401459]