PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn386581
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family WRKY
Protein Properties Length: 136aa    MW: 14895.8 Da    PI: 8.0306
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn386581genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY44.23.8e-14891232357
                 EEEEE-STT---EEEEEE-SSSTTEEEEEEES--S CS
        WRKY  23 sYYrCtsagCpvkkkversaedpkvveitYegeHn 57 
                 sYY Ct+a C vkk+vers++d ++v+ tYeg+H 
  Achn386581  89 SYYWCTTAACGVKKRVERSSDDSSIVVATYEGTHA 123
                 9*********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007742.7E-573126IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.8E-1188123IPR003657WRKY domain
PROSITE profilePS5081112.80589122IPR003657WRKY domain
SuperFamilySSF1182904.32E-1089123IPR003657WRKY domain
PfamPF031066.7E-989122IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MFDVPYCEGE RGSLGFVDML GFQDYGPSLL DLIQTPGPQT LLPPASEVVN TPATTPNSPP  60
VSSSSIGVKE KEEKKKSGIE KRLRRPVWSY YWCTTAACGV KKRVERSSDD SSIVVATYEG  120
THASVPRETS WKQRI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028109764.11e-27probable WRKY transcription factor 48
TrEMBLA0A2R6Q3V09e-40A0A2R6Q3V0_ACTCH; WRKY transcription factor
STRINGVIT_05s0077g00730.t011e-25(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.14e-13WRKY DNA-binding protein 48