PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco000831.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family WRKY
Protein Properties Length: 681aa    MW: 73886.7 Da    PI: 5.091
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco000831.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.41.1e-31284341260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  +DgynWrKYGqK+vk sefprsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+Hnh+k
  Aco000831.1 284 EDGYNWRKYGQKQVKHSEFPRSYYKCTHPNCSVKKKVERSH-EGHITEIIYRGKHNHPK 341
                  8****************************************.***************85 PP
2WRKY104.84.6e-33467525159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+++d k v++tYeg+Hnhe
  Aco000831.1 467 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCSVRKHVERASHDLKSVITTYEGKHNHE 525
                  59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.1E-28279342IPR003657WRKY domain
SuperFamilySSF1182907.06E-25281342IPR003657WRKY domain
SMARTSM007748.7E-35283341IPR003657WRKY domain
PROSITE profilePS5081122.32284342IPR003657WRKY domain
PfamPF031063.9E-24284340IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.4E-37452527IPR003657WRKY domain
SuperFamilySSF1182908.37E-29459527IPR003657WRKY domain
PROSITE profilePS5081137.551462527IPR003657WRKY domain
SMARTSM007744.0E-38467526IPR003657WRKY domain
PfamPF031062.7E-25468525IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    Send to blast
MAEANDCLAV IGDWTPNPSP RTLISNFLNE NFGSKPFPDP LQENGSNGDD VHGSEDQQMV  60
ASPKEEEARQ PKAQFFNNLP LQPNIFNFQK PNTNGGLSER MAARAGLNLP KLNMSRTFPT  120
NVVSSSAEVQ SPYLTIPPGL SPTTLLESPV FLSNSLGQPS PTTGKFSFLQ NCNSNSMTIS  180
LPDEIEDEPL EDVPEEFAFK PPLESKPAYL SSAENTDSPV MNYLPISPSL EENNVHVGQD  240
IEIPKNQSQQ ELNSSSPPND NQQDGGEADP QGENSSQAVG TPAEDGYNWR KYGQKQVKHS  300
EFPRSYYKCT HPNCSVKKKV ERSHEGHITE IIYRGKHNHP KPSSSRRTGA PPSQNGNAQD  360
WQGDVAQNRN AQDWQGDGIE ATSLAAAEFG DPSDAIDVSS TLSNDDNEDE DDGATNGDVL  420
VGQDAEEEEN ESKRRKLDAC AFEMGGASRA VREPRVVVQT TSDVDILDDG YRWRKYGQKV  480
VKGNPNPRSY YKCTHPGCSV RKHVERASHD LKSVITTYEG KHNHEVPAAR SSGHQNSSPG  540
SAAASPSQSH SLHRRPEPMQ DGLVRFNLPL GLLSLPPRDH LGPVGSFSFG LGQSGLANLS  600
MAAMAGLGPV AAMKVPVLLP PPPIAVHAFL GHRPTMESGF MIPKGELKEP VAGSGLPMLN  660
GNTQSVYEQI MRRLPLGPQM *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-34272528178Probable WRKY transcription factor 4
2lex_A1e-34272528178Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020083103.10.0probable WRKY transcription factor 2 isoform X2
TrEMBLA0A199VD600.0A0A199VD60_ANACO; Putative WRKY transcription factor 2 (Fragment)
STRINGXP_008796561.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP207538100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.11e-140WRKY DNA-binding protein 2