PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco001157.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family ERF
Protein Properties Length: 145aa    MW: 16098.9 Da    PI: 7.7533
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco001157.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.81e-162271255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                  y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++  + ++ g
  Aco001157.1 22 EYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAVAYDVTAISFSG 71
                 588******.**********865...5*******************99987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.11E-182180IPR016177DNA-binding domain
PROSITE profilePS5103220.562280IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.6E-262279IPR001471AP2/ERF domain
SMARTSM003808.8E-262286IPR001471AP2/ERF domain
CDDcd000189.01E-242379No hitNo description
PfamPF008471.7E-92368IPR001471AP2/ERF domain
PRINTSPR003675.7E-92334IPR001471AP2/ERF domain
PRINTSPR003675.7E-94561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MAEAPQVIAH RTRRRRSRAS SEYLGVRRRP WGRYAAEIRN PYTKERHWLG TFDTAEEAAV  60
AYDVTAISFS GPARARTNFY YPFFAPPPPP PPPPPPPPSP SSVESEDYLS EITATDDDDS  120
LTIAAILQSF RHSTNLSSSS SLLY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1521791371Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020113857.17e-99ethylene-responsive transcription factor LEP-like
TrEMBLA0A199V5T11e-97A0A199V5T1_ANACO; Ethylene-responsive transcription factor ERF088
STRINGXP_008809528.15e-55(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.15e-30ERF family protein