PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco002068.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 367aa    MW: 39766.8 Da    PI: 4.3543
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco002068.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM39.12.2e-122793373
          NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkr 73
                  Gf F Ptde+l+v+yL++ ++g++l+  +++ e+++y+++P++L     +++ e+ yf +kr ++ ++g  
  Aco002068.1 27 LGFAFTPTDEQLIVHYLRAYAAGQSLRW-DHVVEAQVYSTDPRSLL----GDDGEIgYFLTKRTRHGNRGAS 93
                 7**************************9.8899************6....2344555999999887776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-142193IPR003441NAC domain
PfamPF023653.7E-52889IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MAQQCHPSSR GTAPRPSRSQ SEESVALGFA FTPTDEQLIV HYLRAYAAGQ SLRWDHVVEA  60
QVYSTDPRSL LGDDGEIGYF LTKRTRHGNR GASQEPVLCC IKKSAREIAR SHKRKREEAA  120
RTPAAETDIA ASVRDVNNVN LVSDGLLGRT MAADQQQPIP YHGKNVATGN ADFFEVGECS  180
YSSTNTEYAD SVASADGIKE REMANGDINL ACHGALGMTA DIDLLPIPYL RKWTETMNAD  240
IFYGLRGDVN TGDIGSSTAM EGAGDRQPPL LSYELNGTTA AAATADQQLL LAPDQDERTV  300
VDEAGDWDQL LSVLENEDYS DWFDSVLNDE PSPPPLIDSE TPFRNCQMPP PASSDGAASF  360
CCDPRK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.25e-08NAC domain containing protein 50