PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco002301.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family SAP
Protein Properties Length: 390aa    MW: 42430.3 Da    PI: 7.0345
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco002301.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP251.82.5e-771123598325
          SAP  98 rriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpq.hrdrl 194
                  r +W r +++r+tWr+e+i  h + rnfr +r+++ +l  + a       + + +C +la+sd++laaGf +Gav+lfd+    h+  + ++ ++d l
  Aco002301.1  11 RGVWPRRRRVRATWRDEFIRLHCAGRNFRVGRSAHSHLMPSAA-------PAERTCCRLAVSDRHLAAGFLNGAVQLFDVPGGHHLAFYESHpQHDGL 101
                  679*******************************987754444.......45678999*************************99988876535678* PP

          SAP 195 GrfsravsGivisd..srlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPe 290
                  G+fsravsG+v      rlvfat  Gd+hva +  + + + rra +G+v++dG++vdf+G++rWwvGl+aGvpGra+h+Wd  +e+lv+vGG ltdP+
  Aco002301.1 102 GPFSRAVSGLVFLAdpDRLVFATHSGDVHVADVAEPVSRSERRACTGNVIDDGTMVDFTGNERWWVGLFAGVPGRAWHVWDVGSEQLVYVGGMLTDPD 199
                  *********986432379******************************************************************************** PP

          SAP 291 avmGWhmltelt.elvGrvrvteretavaCtslrlv 325
                  a+ GW mlt l   +vGr r+   +t+v Cts+r+ 
  Aco002301.1 200 ALLGWRMLTHLGgPVVGRARMPWPATVVGCTSSRIQ 235
                  ***********95789******************85 PP
2SAP72.94.6e-23282388348454
          SAP 348 ssldasneayvvvdsrGvatvrrvenleevcrfrvrg..aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss 443
                  +s da +  +++vd++G+++v+ v  leevc f+v    a  + +gC+n gya++  +g +rvW+  + e +lys+rer g    + a+d +va   +
  Aco002301.1 282 ASADACEGRMLTVDENGTGRVHGVPALEEVCAFNVLHggALHHAVGCMNWGYAILGVSGRVRVWDAFTGE-FLYSFRERLGI-SVVAANDSYVAGWDR 377
                  68899999**************************9766899************************99966.********995.56789********** PP

          SAP 444 dgtihlldfga 454
                   + +hl+dfga
  Aco002301.1 378 TSGLHLWDFGA 388
                  **********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.130.10.108.0E-1058150IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509784.03E-1258196IPR017986WD40-repeat-containing domain
SuperFamilySSF509784.03E-12276385IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.108.0E-10280386IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    Send to blast
MPNVARCLPV RGVWPRRRRV RATWRDEFIR LHCAGRNFRV GRSAHSHLMP SAAPAERTCC  60
RLAVSDRHLA AGFLNGAVQL FDVPGGHHLA FYESHPQHDG LGPFSRAVSG LVFLADPDRL  120
VFATHSGDVH VADVAEPVSR SERRACTGNV IDDGTMVDFT GNERWWVGLF AGVPGRAWHV  180
WDVGSEQLVY VGGMLTDPDA LLGWRMLTHL GGPVVGRARM PWPATVVGCT SSRIQVAIYL  240
LLFSISLSRP TTLIIAAQVI NLEEDPPTVA NELELNVVHH GASADACEGR MLTVDENGTG  300
RVHGVPALEE VCAFNVLHGG ALHHAVGCMN WGYAILGVSG RVRVWDAFTG EFLYSFRERL  360
GISVVAANDS YVAGWDRTSG LHLWDFGAV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020086156.10.0transcriptional regulator STERILE APETALA
TrEMBLA0A2H3X4T71e-126A0A2H3X4T7_PHODC; transcriptional regulator STERILE APETALA
STRINGXP_008778313.11e-126(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1848179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.17e-67SAP family protein